You shouldn't, but in any case that's what backups are for. Additionally, if the button on a software/version says 'reinstall', it will reset your server with the new software/version, if it just says 'install', it will not reset your progress. Eitherway there will be a pop-up box that tells you prior to installing the new software/version when it will reset your server.
Thanks man!
Had to ask cuz 1.18 changes world generation and it could affect my base.. thanks anyways!!